Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.73■□□□□ 0.11
COMMD3Q9UBI1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD3Q9UBI1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD3Q9UBI1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD3Q9UBI1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD3Q9UBI1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
COMMD3Q9UBI1 PCDHA1-201ENST00000378133 2726 ntBASIC15.73■□□□□ 0.11
COMMD3Q9UBI1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
COMMD3Q9UBI1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COMMD3Q9UBI1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
COMMD3Q9UBI1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 AL050303.2-201ENST00000619798 666 ntBASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 TSPY26P-202ENST00000565928 3884 ntBASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
COMMD3Q9UBI1 AC009102.3-201ENST00000623118 1491 ntBASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 HYMAI-201ENST00000635591 3347 ntBASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 AC034236.2-201ENST00000606662 1610 ntBASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COMMD3Q9UBI1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.71■□□□□ 0.1
COMMD3Q9UBI1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
COMMD3Q9UBI1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
COMMD3Q9UBI1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.71■□□□□ 0.1
COMMD3Q9UBI1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
COMMD3Q9UBI1 AL596257.1-201ENST00000641463 2694 ntBASIC15.71■□□□□ 0.1
COMMD3Q9UBI1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.71■□□□□ 0.1
COMMD3Q9UBI1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms