Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 AL138688.1-201ENST00000624851 1594 ntBASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 AC073869.1-201ENST00000415574 2762 ntBASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 AC006077.2-201ENST00000623591 457 ntBASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 AC005840.4-201ENST00000541242 2494 ntBASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 AC093677.2-201ENST00000600169 1863 ntBASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CDC42SE1Q9NRR8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CDC42SE1Q9NRR8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms