Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 IER3-202ENST00000376377 1350 ntBASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 ARMC10P1-201ENST00000313754 855 ntBASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 RN7SL606P-201ENST00000472779 293 ntBASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 AL445228.2-201ENST00000605589 952 ntBASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 AC124864.1-201ENST00000623408 392 ntBASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBQLN4Q9NRR5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 DDX43P3-201ENST00000441064 443 ntBASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 AL592071.1-201ENST00000611956 408 ntBASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 AP000550.4-202ENST00000639755 178 ntBASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 AC067852.2-201ENST00000590513 2313 ntBASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBQLN4Q9NRR5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 AC009949.1-201ENST00000623048 1830 ntBASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 CHCHD2P8-201ENST00000429873 447 ntBASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 AC091076.1-201ENST00000610741 619 ntBASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBQLN4Q9NRR5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms