Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 KRT18P28-201ENST00000453838 1332 ntBASIC18.86■□□□□ 0.61
TLR9Q9NR96 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 AC073592.5-201ENST00000624854 528 ntBASIC18.86■□□□□ 0.61
TLR9Q9NR96 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TLR9Q9NR96 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR9Q9NR96 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 ESPNP-201ENST00000270691 2015 ntBASIC18.85■□□□□ 0.61
TLR9Q9NR96 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.85■□□□□ 0.61
TLR9Q9NR96 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR9Q9NR96 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TLR9Q9NR96 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TLR9Q9NR96 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.84■□□□□ 0.61
TLR9Q9NR96 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TLR9Q9NR96 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
TLR9Q9NR96 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TLR9Q9NR96 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TLR9Q9NR96 CRYGEP-201ENST00000412192 528 ntBASIC18.84■□□□□ 0.61
TLR9Q9NR96 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.84■□□□□ 0.61
TLR9Q9NR96 AL020989.1-201ENST00000422979 469 ntBASIC18.84■□□□□ 0.61
TLR9Q9NR96 METTL21AP1-201ENST00000438852 635 ntBASIC18.84■□□□□ 0.61
TLR9Q9NR96 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.84■□□□□ 0.61
TLR9Q9NR96 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.84■□□□□ 0.61
TLR9Q9NR96 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
TLR9Q9NR96 SNHG9-202ENST00000564014 471 ntBASIC18.84■□□□□ 0.61
TLR9Q9NR96 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
TLR9Q9NR96 AC004706.3-202ENST00000621574 984 ntBASIC18.84■□□□□ 0.61
TLR9Q9NR96 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.84■□□□□ 0.61
TLR9Q9NR96 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TLR9Q9NR96 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TLR9Q9NR96 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.84■□□□□ 0.61
TLR9Q9NR96 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TLR9Q9NR96 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
TLR9Q9NR96 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TLR9Q9NR96 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
TLR9Q9NR96 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TLR9Q9NR96 KRT8P47-201ENST00000604727 1398 ntBASIC18.83■□□□□ 0.61
TLR9Q9NR96 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TLR9Q9NR96 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TLR9Q9NR96 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TLR9Q9NR96 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TLR9Q9NR96 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.83■□□□□ 0.6
TLR9Q9NR96 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.83■□□□□ 0.6
TLR9Q9NR96 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.83■□□□□ 0.6
TLR9Q9NR96 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.83■□□□□ 0.6
TLR9Q9NR96 YBX1P5-201ENST00000509441 847 ntBASIC18.83■□□□□ 0.6
TLR9Q9NR96 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TLR9Q9NR96 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TLR9Q9NR96 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TLR9Q9NR96 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TLR9Q9NR96 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TLR9Q9NR96 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TLR9Q9NR96 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.83■□□□□ 0.6
TLR9Q9NR96 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TLR9Q9NR96 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TLR9Q9NR96 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms