Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC4Q9NPP4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 LIN28AP1-201ENST00000429574 405 ntBASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 ATP5G1P1-201ENST00000448724 379 ntBASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 AL391807.1-203ENST00000604392 2365 ntBASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC4Q9NPP4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 AC113404.2-201ENST00000507884 177 ntBASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 AL136038.4-201ENST00000603606 1261 ntBASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 AC133561.5-201ENST00000635547 218 ntBASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC4Q9NPP4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC4Q9NPP4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms