Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 BCL2-203ENST00000589955 5011 ntBASIC18.73■□□□□ 0.59
ATXN3LQ9H3M9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 AC018712.1-201ENST00000455767 687 ntBASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 AP005117.1-201ENST00000584346 1413 ntBASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 AC132938.6-201ENST00000623828 1655 ntBASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATXN3LQ9H3M9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATXN3LQ9H3M9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 SLC25A1P1-201ENST00000528351 927 ntBASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.7■□□□□ 0.58
ATXN3LQ9H3M9 AL049840.3-201ENST00000602669 611 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms