Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 AC026691.1-201ENST00000602502 2017 ntBASIC17.03■□□□□ 0.32
VCX3BQ9H321 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.02■□□□□ 0.32
VCX3BQ9H321 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
VCX3BQ9H321 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.02■□□□□ 0.32
VCX3BQ9H321 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
VCX3BQ9H321 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.02■□□□□ 0.32
VCX3BQ9H321 CYP2T1P-201ENST00000432607 1285 ntBASIC17.02■□□□□ 0.32
VCX3BQ9H321 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.02■□□□□ 0.32
VCX3BQ9H321 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.02■□□□□ 0.32
VCX3BQ9H321 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3BQ9H321 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.02■□□□□ 0.31
VCX3BQ9H321 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3BQ9H321 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3BQ9H321 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3BQ9H321 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3BQ9H321 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.02■□□□□ 0.31
VCX3BQ9H321 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3BQ9H321 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
VCX3BQ9H321 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.02■□□□□ 0.31
VCX3BQ9H321 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3BQ9H321 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 LSM12P1-201ENST00000411836 588 ntBASIC17.01■□□□□ 0.31
VCX3BQ9H321 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.01■□□□□ 0.31
VCX3BQ9H321 AL365209.1-201ENST00000624418 6473 ntBASIC17.01■□□□□ 0.31
VCX3BQ9H321 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3BQ9H321 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VCX3BQ9H321 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17■□□□□ 0.31
VCX3BQ9H321 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VCX3BQ9H321 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VCX3BQ9H321 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17■□□□□ 0.31
VCX3BQ9H321 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17■□□□□ 0.31
VCX3BQ9H321 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17■□□□□ 0.31
VCX3BQ9H321 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VCX3BQ9H321 PNN-205ENST00000556530 601 ntTSL 2 BASIC17■□□□□ 0.31
VCX3BQ9H321 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 AL121832.2-201ENST00000610979 668 ntBASIC17■□□□□ 0.31
VCX3BQ9H321 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17■□□□□ 0.31
VCX3BQ9H321 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 MIR600HG-201ENST00000449175 5984 ntBASIC17■□□□□ 0.31
VCX3BQ9H321 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 RCC2P3-201ENST00000418112 1537 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms