Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AP000550.4-202ENST00000639755 178 ntBASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 AL031432.5-201ENST00000641059 760 ntBASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 PCED1CP-201ENST00000419887 785 ntBASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 CR769767.2-201ENST00000622735 460 ntBASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 AC080080.1-201ENST00000625121 2420 ntBASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FOXP3Q9BZS1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 PCDHA12-202ENST00000613593 2588 ntBASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 HOMER2P1-201ENST00000455653 964 ntBASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 AC112497.1-201ENST00000624824 639 ntBASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXP3Q9BZS1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms