Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AP002026.1-205ENST00000509295 915 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 AC104997.1-201ENST00000519761 717 ntBASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 NBEAP1-201ENST00000554452 979 ntBASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 CCDC58P3-201ENST00000590792 430 ntBASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 AC022432.1-201ENST00000595739 310 ntBASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 MTCYBP22-201ENST00000603788 447 ntBASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 AL596442.2-201ENST00000610240 980 ntBASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 CXADRP3-202ENST00000617265 1100 ntBASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 LARS-216ENST00000618084 720 ntTSL 5 BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 AC133552.2-201ENST00000619106 1032 ntBASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 LINC00694-203ENST00000636468 808 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 AC024614.3-201ENST00000637860 256 ntBASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 FAM238C-201ENST00000638416 868 ntTSL 2 BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 LINC00526-201ENST00000581067 1875 ntBASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC11.17□□□□□ -0.62
KRTAP3-3Q9BYR6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 GUSBP5-202ENST00000510805 1989 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 RNU6-609P-201ENST00000365459 107 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 USP9YP9-201ENST00000429406 715 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 B3GNT2P1-201ENST00000434960 952 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 USP9YP8-201ENST00000441913 500 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 LINC02248-202ENST00000451579 606 ntTSL 3 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AK2-206ENST00000480134 811 ntTSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 SPCS2P3-201ENST00000500401 656 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 RNU6-1153P-201ENST00000516760 105 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC009630.1-201ENST00000523081 559 ntTSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC022832.1-201ENST00000530718 645 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 PA2G4-206ENST00000552766 1085 ntTSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC012182.1-201ENST00000570133 895 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC067969.1-201ENST00000595853 552 ntTSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AP000525.1-201ENST00000608286 694 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AL354976.1-201ENST00000613843 387 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC009159.1-201ENST00000618386 642 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 EIF5P2-201ENST00000618904 1035 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AL713922.2-201ENST00000619384 716 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AL445493.3-201ENST00000619568 477 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AC091965.5-201ENST00000624785 342 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 AL049842.1-201ENST00000402902 1479 ntBASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 TFB1M-201ENST00000367166 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 PSMA8-201ENST00000308268 1804 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms