Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 AL162727.3-201ENST00000635661 2787 ntBASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 AP000523.1-201ENST00000398242 1049 ntBASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 NEK4P2-201ENST00000580004 1012 ntBASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TUBA1CQ9BQE3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 MCCD1P1-208ENST00000445732 328 ntBASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1CQ9BQE3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms