Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL353692.3-201ENST00000407031 1396 ntBASIC15.97■□□□□ 0.15
USB1Q9BQ65 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
USB1Q9BQ65 AL596257.1-201ENST00000641463 2694 ntBASIC15.97■□□□□ 0.15
USB1Q9BQ65 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
USB1Q9BQ65 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
USB1Q9BQ65 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
USB1Q9BQ65 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
USB1Q9BQ65 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
USB1Q9BQ65 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
USB1Q9BQ65 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.96■□□□□ 0.15
USB1Q9BQ65 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
USB1Q9BQ65 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
USB1Q9BQ65 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
USB1Q9BQ65 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
USB1Q9BQ65 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 MTND4LP12-201ENST00000448237 295 ntBASIC15.96■□□□□ 0.15
USB1Q9BQ65 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.96■□□□□ 0.15
USB1Q9BQ65 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 AP002414.4-201ENST00000589764 1148 ntBASIC15.96■□□□□ 0.15
USB1Q9BQ65 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
USB1Q9BQ65 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
USB1Q9BQ65 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
USB1Q9BQ65 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
USB1Q9BQ65 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
USB1Q9BQ65 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
USB1Q9BQ65 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
USB1Q9BQ65 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.96■□□□□ 0.14
USB1Q9BQ65 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
USB1Q9BQ65 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.96■□□□□ 0.14
USB1Q9BQ65 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.95■□□□□ 0.14
USB1Q9BQ65 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
USB1Q9BQ65 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.95■□□□□ 0.14
USB1Q9BQ65 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.95■□□□□ 0.14
USB1Q9BQ65 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 AP002383.4-201ENST00000442518 975 ntBASIC15.95■□□□□ 0.14
USB1Q9BQ65 AC012615.1-201ENST00000565797 1299 ntBASIC15.95■□□□□ 0.14
USB1Q9BQ65 MIR3180-1-201ENST00000580374 94 ntBASIC15.95■□□□□ 0.14
USB1Q9BQ65 MIR3180-3-201ENST00000584616 94 ntBASIC15.95■□□□□ 0.14
USB1Q9BQ65 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.95■□□□□ 0.14
USB1Q9BQ65 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.95■□□□□ 0.14
USB1Q9BQ65 Z69720.1-201ENST00000601483 472 ntBASIC15.95■□□□□ 0.14
USB1Q9BQ65 AC092119.3-201ENST00000612618 583 ntBASIC15.95■□□□□ 0.14
USB1Q9BQ65 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.95■□□□□ 0.14
USB1Q9BQ65 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.95■□□□□ 0.14
USB1Q9BQ65 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
USB1Q9BQ65 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USB1Q9BQ65 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
USB1Q9BQ65 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
USB1Q9BQ65 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
USB1Q9BQ65 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.94■□□□□ 0.14
USB1Q9BQ65 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
USB1Q9BQ65 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
USB1Q9BQ65 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
USB1Q9BQ65 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.94■□□□□ 0.14
USB1Q9BQ65 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
USB1Q9BQ65 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
USB1Q9BQ65 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
USB1Q9BQ65 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
USB1Q9BQ65 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.94■□□□□ 0.14
USB1Q9BQ65 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
USB1Q9BQ65 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.94■□□□□ 0.14
USB1Q9BQ65 AL450487.1-201ENST00000426799 995 ntBASIC15.94■□□□□ 0.14
USB1Q9BQ65 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
USB1Q9BQ65 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.94■□□□□ 0.14
USB1Q9BQ65 PRELID1P1-202ENST00000567272 903 ntBASIC15.94■□□□□ 0.14
USB1Q9BQ65 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.94■□□□□ 0.14
USB1Q9BQ65 CLEC4GP1-201ENST00000596555 870 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms