Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.97□□□□□ -0.01
CCL13Q99616 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.97□□□□□ -0.01
CCL13Q99616 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL13Q99616 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.97□□□□□ -0.01
CCL13Q99616 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL13Q99616 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL13Q99616 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL13Q99616 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CCL13Q99616 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL13Q99616 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CCL13Q99616 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCL13Q99616 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL13Q99616 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCL13Q99616 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 LINC00265-3P-201ENST00000447588 903 ntBASIC14.96□□□□□ -0.01
CCL13Q99616 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.96□□□□□ -0.01
CCL13Q99616 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL13Q99616 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL13Q99616 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 NPAP1P7-201ENST00000613027 823 ntBASIC14.96□□□□□ -0.01
CCL13Q99616 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.96□□□□□ -0.01
CCL13Q99616 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCL13Q99616 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL13Q99616 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CCL13Q99616 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.96□□□□□ -0.02
CCL13Q99616 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCL13Q99616 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCL13Q99616 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCL13Q99616 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCL13Q99616 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL13Q99616 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL13Q99616 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL13Q99616 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL13Q99616 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.95□□□□□ -0.02
CCL13Q99616 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL13Q99616 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 ATP5G2P1-201ENST00000433580 426 ntBASIC14.95□□□□□ -0.02
CCL13Q99616 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCL13Q99616 TOB2P1-201ENST00000469761 992 ntBASIC14.95□□□□□ -0.02
CCL13Q99616 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.95□□□□□ -0.02
CCL13Q99616 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 TPSP2-201ENST00000561760 610 ntBASIC14.95□□□□□ -0.02
CCL13Q99616 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL13Q99616 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL13Q99616 AC092329.2-201ENST00000598402 547 ntBASIC14.95□□□□□ -0.02
CCL13Q99616 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CCL13Q99616 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CCL13Q99616 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL13Q99616 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.95□□□□□ -0.02
CCL13Q99616 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCL13Q99616 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCL13Q99616 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL13Q99616 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL13Q99616 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CCL13Q99616 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms