Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB18PQ96TA0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 AC012313.1-201ENST00000593393 3059 ntBASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 AC080080.1-201ENST00000625121 2420 ntBASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB18PQ96TA0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 AL138688.1-201ENST00000624851 1594 ntBASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 AC106820.2-201ENST00000563775 3264 ntBASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 KRT18P21-201ENST00000515767 1272 ntBASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB18PQ96TA0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB18PQ96TA0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
PCDHB18PQ96TA0 CROCCP2-202ENST00000412962 2773 ntBASIC18.89■□□□□ 0.62
PCDHB18PQ96TA0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 LINC01451-201ENST00000623792 534 ntBASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB18PQ96TA0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 AC020916.1-201ENST00000587762 1774 ntBASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms