Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 LINC01451-201ENST00000623792 534 ntBASIC14.49□□□□□ -0.09
RAB40CQ96S21 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
RAB40CQ96S21 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40CQ96S21 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 KRT18P29-201ENST00000397031 1267 ntBASIC14.48□□□□□ -0.09
RAB40CQ96S21 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 AP000692.2-201ENST00000608391 879 ntBASIC14.48□□□□□ -0.09
RAB40CQ96S21 AC124016.1-201ENST00000609552 612 ntBASIC14.48□□□□□ -0.09
RAB40CQ96S21 MIR6786-201ENST00000616843 113 ntBASIC14.48□□□□□ -0.09
RAB40CQ96S21 CR392000.1-201ENST00000624770 1228 ntBASIC14.48□□□□□ -0.09
RAB40CQ96S21 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40CQ96S21 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAB40CQ96S21 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40CQ96S21 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RAB40CQ96S21 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms