Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 AC006504.4-201ENST00000592118 1568 ntBASIC18.88■□□□□ 0.61
ZNF558Q96NG5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF558Q96NG5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 MIR4751-201ENST00000578027 74 ntBASIC18.87■□□□□ 0.61
ZNF558Q96NG5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 AC148477.5-201ENST00000625164 1645 ntBASIC18.87■□□□□ 0.61
ZNF558Q96NG5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ZNF558Q96NG5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.86■□□□□ 0.61
ZNF558Q96NG5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 AC211486.1-202ENST00000416371 468 ntBASIC18.86■□□□□ 0.61
ZNF558Q96NG5 MCCD1P2-201ENST00000423228 335 ntBASIC18.86■□□□□ 0.61
ZNF558Q96NG5 DNAJB3-202ENST00000449667 1266 ntBASIC18.86■□□□□ 0.61
ZNF558Q96NG5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 AC211476.1-201ENST00000503899 468 ntBASIC18.86■□□□□ 0.61
ZNF558Q96NG5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF558Q96NG5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 AC002310.6-201ENST00000624451 1377 ntBASIC18.85■□□□□ 0.61
ZNF558Q96NG5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 AC108073.2-201ENST00000464002 357 ntBASIC18.85■□□□□ 0.61
ZNF558Q96NG5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 AC116407.2-201ENST00000613639 860 ntBASIC18.85■□□□□ 0.61
ZNF558Q96NG5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF558Q96NG5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms