Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE1Q96MT3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 BICD1-207ENST00000551848 1962 ntBASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 RCN1P2-201ENST00000398357 915 ntBASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 POM121L3P-201ENST00000419331 1163 ntBASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.41■□□□□ 0.54
PRICKLE1Q96MT3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 EMBP1-201ENST00000458200 901 ntBASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PRICKLE1Q96MT3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRICKLE1Q96MT3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PRICKLE1Q96MT3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
PRICKLE1Q96MT3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PRICKLE1Q96MT3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PRICKLE1Q96MT3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.39■□□□□ 0.54
PRICKLE1Q96MT3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.39■□□□□ 0.54
PRICKLE1Q96MT3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PRICKLE1Q96MT3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 KRT16P4-201ENST00000453883 522 ntBASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 AC009533.2-201ENST00000543664 586 ntBASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 AC011467.2-201ENST00000598425 242 ntBASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 AC139713.2-201ENST00000641328 2723 ntBASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRICKLE1Q96MT3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms