Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RITA1Q96K30 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.33□□□□□ -0.11
RITA1Q96K30 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 PP12613-201ENST00000424958 2230 ntBASIC14.33□□□□□ -0.12
RITA1Q96K30 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.33□□□□□ -0.12
RITA1Q96K30 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.33□□□□□ -0.12
RITA1Q96K30 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.33□□□□□ -0.12
RITA1Q96K30 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.33□□□□□ -0.12
RITA1Q96K30 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.33□□□□□ -0.12
RITA1Q96K30 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 MIR1224-201ENST00000408193 85 ntBASIC14.33□□□□□ -0.12
RITA1Q96K30 PCED1CP-201ENST00000419887 785 ntBASIC14.33□□□□□ -0.12
RITA1Q96K30 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.33□□□□□ -0.12
RITA1Q96K30 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RITA1Q96K30 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.33□□□□□ -0.12
RITA1Q96K30 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.33□□□□□ -0.12
RITA1Q96K30 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.33□□□□□ -0.12
RITA1Q96K30 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.33□□□□□ -0.12
RITA1Q96K30 AC010331.1-201ENST00000611423 582 ntBASIC14.33□□□□□ -0.12
RITA1Q96K30 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.33□□□□□ -0.12
RITA1Q96K30 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RITA1Q96K30 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.33□□□□□ -0.12
RITA1Q96K30 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RITA1Q96K30 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RITA1Q96K30 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
RITA1Q96K30 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.32□□□□□ -0.12
RITA1Q96K30 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RITA1Q96K30 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RITA1Q96K30 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RITA1Q96K30 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
RITA1Q96K30 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.32□□□□□ -0.12
RITA1Q96K30 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.32□□□□□ -0.12
RITA1Q96K30 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.32□□□□□ -0.12
RITA1Q96K30 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
RITA1Q96K30 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.32□□□□□ -0.12
RITA1Q96K30 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.32□□□□□ -0.12
RITA1Q96K30 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.32□□□□□ -0.12
RITA1Q96K30 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 RN7SL606P-201ENST00000472779 293 ntBASIC14.32□□□□□ -0.12
RITA1Q96K30 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.32□□□□□ -0.12
RITA1Q96K30 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.32□□□□□ -0.12
RITA1Q96K30 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.32□□□□□ -0.12
RITA1Q96K30 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.32□□□□□ -0.12
RITA1Q96K30 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 AC116407.4-201ENST00000623319 1061 ntBASIC14.32□□□□□ -0.12
RITA1Q96K30 AC124864.1-201ENST00000623408 392 ntBASIC14.32□□□□□ -0.12
RITA1Q96K30 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RITA1Q96K30 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RITA1Q96K30 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RITA1Q96K30 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RITA1Q96K30 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RITA1Q96K30 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RITA1Q96K30 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 HTR7P1-202ENST00000624664 4411 ntBASIC14.31□□□□□ -0.12
RITA1Q96K30 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RITA1Q96K30 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RITA1Q96K30 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RITA1Q96K30 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms