Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 LINC00167-201ENST00000530583 1419 ntBASIC20.72■□□□□ 0.91
PGBD1Q96JS3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 MIR3180-1-201ENST00000580374 94 ntBASIC20.72■□□□□ 0.91
PGBD1Q96JS3 MIR3180-3-201ENST00000584616 94 ntBASIC20.72■□□□□ 0.91
PGBD1Q96JS3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.72■□□□□ 0.91
PGBD1Q96JS3 AC132938.6-201ENST00000623828 1655 ntBASIC20.72■□□□□ 0.91
PGBD1Q96JS3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PGBD1Q96JS3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 CHCHD2P8-201ENST00000429873 447 ntBASIC20.71■□□□□ 0.91
PGBD1Q96JS3 HCG4P8-203ENST00000443049 980 ntBASIC20.71■□□□□ 0.91
PGBD1Q96JS3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PGBD1Q96JS3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.7■□□□□ 0.91
PGBD1Q96JS3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 PCDHA12-202ENST00000613593 2588 ntBASIC20.7■□□□□ 0.9
PGBD1Q96JS3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 ATP5G2P1-201ENST00000433580 426 ntBASIC20.7■□□□□ 0.9
PGBD1Q96JS3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 KRT18P1-202ENST00000452408 1331 ntBASIC20.7■□□□□ 0.9
PGBD1Q96JS3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 AC100803.2-201ENST00000562459 1963 ntBASIC20.7■□□□□ 0.9
PGBD1Q96JS3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PGBD1Q96JS3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 AL592071.1-201ENST00000611956 408 ntBASIC20.69■□□□□ 0.9
PGBD1Q96JS3 IGHV3-41-201ENST00000613121 348 ntBASIC20.69■□□□□ 0.9
PGBD1Q96JS3 AC124864.1-201ENST00000623408 392 ntBASIC20.69■□□□□ 0.9
PGBD1Q96JS3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PGBD1Q96JS3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms