Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 UNC93B2-201ENST00000285383 730 ntBASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 SNORA78-201ENST00000459373 127 ntBASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 BX088651.1-201ENST00000540551 451 ntBASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 PCDHB19P-201ENST00000570871 2371 ntBASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHAMP1Q96JM3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 ARMC10P1-201ENST00000313754 855 ntBASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 AL445228.2-201ENST00000605589 952 ntBASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 KRT8P47-201ENST00000604727 1398 ntBASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.67■□□□□ 0.9
CHAMP1Q96JM3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 FLJ38576-201ENST00000623820 2459 ntBASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms