Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 TPTE2P1-204ENST00000435256 593 ntBASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 AC122108.2-201ENST00000611946 526 ntBASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 AC084781.1-201ENST00000613737 656 ntBASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 CU459211.1-201ENST00000635667 749 ntBASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 AL109659.2-201ENST00000606809 1674 ntBASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MS4A3Q96HJ5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 AC068733.1-201ENST00000532430 1288 ntTSL 2 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 MIR3180-5-201ENST00000583743 153 ntBASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 AP003117.1-201ENST00000602771 554 ntBASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 LINC00896-202ENST00000609602 2128 ntBASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.28■□□□□ 0.2
MS4A3Q96HJ5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 RNU6-673P-201ENST00000365084 104 ntBASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms