Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 AL133373.2-201ENST00000623187 2828 ntBASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 LINC01711-201ENST00000598340 967 ntBASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 AL592071.1-201ENST00000611956 408 ntBASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 ESPNP-201ENST00000270691 2015 ntBASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 ABALON-201ENST00000629058 1903 ntBASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 NOC2LP1-202ENST00000452600 2235 ntBASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SH3KBP1Q96B97 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 RN7SL606P-201ENST00000472779 293 ntBASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 AC111152.3-201ENST00000569699 673 ntBASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 AC011840.4-201ENST00000578471 627 ntBASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 AL121772.3-201ENST00000610840 674 ntBASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 AC012313.10-201ENST00000623509 926 ntBASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH3KBP1Q96B97 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 AC246785.2-201ENST00000432512 513 ntBASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 AC004263.2-201ENST00000617183 678 ntBASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 AC005332.8-201ENST00000622750 2735 ntBASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH3KBP1Q96B97 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 AC233702.3-201ENST00000578656 1387 ntBASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms