Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 DDX43P3-201ENST00000441064 443 ntBASIC19.18■□□□□ 0.66
SEMA4DQ92854 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 TPSP2-201ENST00000561760 610 ntBASIC19.18■□□□□ 0.66
SEMA4DQ92854 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 AP002414.4-201ENST00000589764 1148 ntBASIC19.18■□□□□ 0.66
SEMA4DQ92854 AC091076.1-201ENST00000610741 619 ntBASIC19.18■□□□□ 0.66
SEMA4DQ92854 NPAP1P7-201ENST00000613027 823 ntBASIC19.18■□□□□ 0.66
SEMA4DQ92854 AC116407.2-201ENST00000613639 860 ntBASIC19.18■□□□□ 0.66
SEMA4DQ92854 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 AC010460.3-201ENST00000511359 1579 ntBASIC19.18■□□□□ 0.66
SEMA4DQ92854 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEMA4DQ92854 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SEMA4DQ92854 LETM1P2-201ENST00000597330 2178 ntBASIC19.17■□□□□ 0.66
SEMA4DQ92854 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SEMA4DQ92854 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SEMA4DQ92854 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.17■□□□□ 0.66
SEMA4DQ92854 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.17■□□□□ 0.66
SEMA4DQ92854 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.17■□□□□ 0.66
SEMA4DQ92854 KRT18P1-202ENST00000452408 1331 ntBASIC19.17■□□□□ 0.66
SEMA4DQ92854 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
SEMA4DQ92854 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SEMA4DQ92854 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEMA4DQ92854 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.17■□□□□ 0.66
SEMA4DQ92854 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 LINC00304-203ENST00000565008 1864 ntBASIC19.16■□□□□ 0.66
SEMA4DQ92854 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.16■□□□□ 0.66
SEMA4DQ92854 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.16■□□□□ 0.66
SEMA4DQ92854 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.16■□□□□ 0.66
SEMA4DQ92854 AC011840.4-201ENST00000578471 627 ntBASIC19.16■□□□□ 0.66
SEMA4DQ92854 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.16■□□□□ 0.66
SEMA4DQ92854 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SEMA4DQ92854 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.16■□□□□ 0.66
SEMA4DQ92854 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 PP12613-201ENST00000424958 2230 ntBASIC19.16■□□□□ 0.66
SEMA4DQ92854 AC125634.1-201ENST00000438758 1403 ntBASIC19.16■□□□□ 0.66
SEMA4DQ92854 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEMA4DQ92854 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 DRAXINP1-201ENST00000437611 948 ntBASIC19.15■□□□□ 0.66
SEMA4DQ92854 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 AL138831.2-201ENST00000606564 490 ntBASIC19.15■□□□□ 0.66
SEMA4DQ92854 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms