Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 AC011270.2-201ENST00000624293 2550 ntBASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 RN7SL850P-201ENST00000579959 291 ntBASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 AL023806.1-201ENST00000603994 1649 ntBASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCHCR1Q8TD31 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 FAM210CP-201ENST00000445714 574 ntBASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.61■□□□□ 0.57
CCHCR1Q8TD31 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 AC022898.2-201ENST00000616822 1312 ntBASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms