Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNIH3Q8TBE1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 FAM207BP-201ENST00000447172 505 ntBASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 AC069544.1-201ENST00000609399 999 ntBASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.33■□□□□ 0.2
CNIH3Q8TBE1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 UNC93B5-201ENST00000530315 699 ntBASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 AC142086.2-201ENST00000569753 217 ntBASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 AC233263.1-201ENST00000578059 224 ntBASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 AC104771.1-201ENST00000603335 964 ntBASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 AL024508.2-201ENST00000607749 1894 ntBASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 AC132938.6-201ENST00000623828 1655 ntBASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CNIH3Q8TBE1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 AC239809.2-201ENST00000415381 517 ntBASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms