Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 RBM17P1-201ENST00000453646 1190 ntBASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DNAAF1Q8NEP3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 AC008550.1-201ENST00000511500 884 ntBASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 AP003041.3-201ENST00000527151 707 ntBASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 BX088651.1-201ENST00000540551 451 ntBASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 FITM1-202ENST00000559294 800 ntBASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 MIR3180-4-201ENST00000582223 153 ntBASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.73■□□□□ 0.11
DNAAF1Q8NEP3 AC011676.5-201ENST00000624864 2660 ntBASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 NKILA-202ENST00000614771 2598 ntBASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 AC092338.2-201ENST00000568827 1415 ntBASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 KRT18P23-201ENST00000435622 1283 ntBASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 AC116562.4-202ENST00000641738 218 ntBASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNAAF1Q8NEP3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms