Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 DDX43P3-201ENST00000441064 443 ntBASIC27.7■■■□□ 2.02
CFAP43Q8NDM7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CFAP43Q8NDM7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC27.7■■■□□ 2.02
CFAP43Q8NDM7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC27.7■■■□□ 2.02
CFAP43Q8NDM7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC27.7■■■□□ 2.02
CFAP43Q8NDM7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC27.7■■■□□ 2.02
CFAP43Q8NDM7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC27.7■■■□□ 2.02
CFAP43Q8NDM7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CFAP43Q8NDM7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 AC135776.1-201ENST00000319817 2481 ntBASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC27.69■■■□□ 2.02
CFAP43Q8NDM7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 HLA-J-202ENST00000469281 1241 ntBASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 PDPK2P-202ENST00000562415 1191 ntBASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 AC093512.1-201ENST00000617969 520 ntBASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CFAP43Q8NDM7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 AL139400.1-201ENST00000366220 510 ntBASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CFAP43Q8NDM7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 MIR4751-201ENST00000578027 74 ntBASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CFAP43Q8NDM7 STOM-202ENST00000347359 870 ntTSL 2 BASIC27.65■■■□□ 2.02
CFAP43Q8NDM7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC27.65■■■□□ 2.02
CFAP43Q8NDM7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
CFAP43Q8NDM7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
CFAP43Q8NDM7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC27.65■■■□□ 2.02
CFAP43Q8NDM7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC27.65■■■□□ 2.02
CFAP43Q8NDM7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CFAP43Q8NDM7 AL031432.2-201ENST00000566714 459 ntBASIC27.65■■■□□ 2.02
CFAP43Q8NDM7 AL928711.1-201ENST00000570165 459 ntBASIC27.65■■■□□ 2.02
CFAP43Q8NDM7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC27.65■■■□□ 2.02
CFAP43Q8NDM7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC27.65■■■□□ 2.02
CFAP43Q8NDM7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms