Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCAB3Q8N7B9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.8■□□□□ 0.44
EFCAB3Q8N7B9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCAB3Q8N7B9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.8■□□□□ 0.44
EFCAB3Q8N7B9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.8■□□□□ 0.44
EFCAB3Q8N7B9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
EFCAB3Q8N7B9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFCAB3Q8N7B9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 SIRPAP1-201ENST00000448467 1770 ntBASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 AC008622.2-201ENST00000617006 1229 ntBASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 AC068587.9-201ENST00000641814 219 ntBASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 AC141586.5-201ENST00000624546 2050 ntBASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFCAB3Q8N7B9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 SLC25A1P2-201ENST00000430693 912 ntBASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 YBX1P2-201ENST00000489612 999 ntBASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 AL353729.2-201ENST00000605859 1249 ntBASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 MYC-208ENST00000641036 567 ntBASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCAB3Q8N7B9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 PCED1CP-201ENST00000419887 785 ntBASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 HMGB1P8-201ENST00000558211 949 ntBASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 AL121956.5-201ENST00000625261 221 ntBASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EFCAB3Q8N7B9 PKD1P1-201ENST00000458669 6805 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms