Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 MIR662-201ENST00000384847 95 ntBASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 AP003733.1-201ENST00000491725 852 ntBASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE9Q8IYJ1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 KRT18P65-201ENST00000439811 1286 ntBASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 KRT18P21-201ENST00000515767 1272 ntBASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 AC083849.1-201ENST00000615227 514 ntBASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE9Q8IYJ1 AC008894.3-201ENST00000624324 3103 ntBASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 IGHGP-201ENST00000390555 1178 ntBASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 SPDYE13P-201ENST00000445314 798 ntBASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CPNE9Q8IYJ1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms