Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SLX4Q8IY92 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLX4Q8IY92 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLX4Q8IY92 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLX4Q8IY92 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.56■■□□□ 1.04
SLX4Q8IY92 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLX4Q8IY92 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLX4Q8IY92 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLX4Q8IY92 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLX4Q8IY92 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLX4Q8IY92 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLX4Q8IY92 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLX4Q8IY92 AL390955.2-201ENST00000603032 514 ntBASIC21.55■■□□□ 1.04
SLX4Q8IY92 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLX4Q8IY92 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLX4Q8IY92 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLX4Q8IY92 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.55■■□□□ 1.04
SLX4Q8IY92 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLX4Q8IY92 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLX4Q8IY92 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.54■■□□□ 1.04
SLX4Q8IY92 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.54■■□□□ 1.04
SLX4Q8IY92 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.54■■□□□ 1.04
SLX4Q8IY92 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SLX4Q8IY92 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.54■■□□□ 1.04
SLX4Q8IY92 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.54■■□□□ 1.04
SLX4Q8IY92 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.54■■□□□ 1.04
SLX4Q8IY92 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 AC093520.2-201ENST00000561830 333 ntBASIC21.54■■□□□ 1.04
SLX4Q8IY92 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.54■■□□□ 1.04
SLX4Q8IY92 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SLX4Q8IY92 AC116562.4-201ENST00000641316 2276 ntBASIC21.54■■□□□ 1.04
SLX4Q8IY92 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.54■■□□□ 1.04
SLX4Q8IY92 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.54■■□□□ 1.04
SLX4Q8IY92 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLX4Q8IY92 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLX4Q8IY92 AL590787.1-201ENST00000568856 1315 ntBASIC21.53■■□□□ 1.04
SLX4Q8IY92 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SLX4Q8IY92 DUTP2-201ENST00000519164 463 ntBASIC21.53■■□□□ 1.04
SLX4Q8IY92 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.53■■□□□ 1.04
SLX4Q8IY92 STK25P1-201ENST00000585406 838 ntBASIC21.53■■□□□ 1.04
SLX4Q8IY92 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.53■■□□□ 1.04
SLX4Q8IY92 AC004835.2-201ENST00000603762 682 ntBASIC21.53■■□□□ 1.04
SLX4Q8IY92 Z92544.3-201ENST00000624747 417 ntBASIC21.53■■□□□ 1.04
SLX4Q8IY92 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLX4Q8IY92 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.53■■□□□ 1.04
SLX4Q8IY92 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLX4Q8IY92 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLX4Q8IY92 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLX4Q8IY92 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLX4Q8IY92 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLX4Q8IY92 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLX4Q8IY92 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.53■■□□□ 1.04
SLX4Q8IY92 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLX4Q8IY92 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLX4Q8IY92 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLX4Q8IY92 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 ACTG1P4-201ENST00000425123 1122 ntBASIC21.52■■□□□ 1.04
SLX4Q8IY92 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLX4Q8IY92 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLX4Q8IY92 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLX4Q8IY92 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLX4Q8IY92 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.52■■□□□ 1.04
SLX4Q8IY92 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms