Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 HTR7P1-202ENST00000624664 4411 ntBASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 AP000867.3-201ENST00000524675 377 ntBASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 AC005336.2-201ENST00000593183 939 ntBASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCUBE3Q8IX30 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SCUBE3Q8IX30 AC134043.2-201ENST00000624206 2238 ntBASIC18.77■□□□□ 0.59
SCUBE3Q8IX30 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 AC246785.2-201ENST00000432512 513 ntBASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 HCG11-201ENST00000411553 5696 ntBASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCUBE3Q8IX30 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 VENTXP7-201ENST00000475503 772 ntBASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 AC006116.8-202ENST00000587620 1550 ntBASIC18.75■□□□□ 0.59
SCUBE3Q8IX30 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms