Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
RAB43Q86YS6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 IGHV3-47-201ENST00000425060 335 ntBASIC17.06■□□□□ 0.32
RAB43Q86YS6 FDX1P1-201ENST00000449115 551 ntBASIC17.06■□□□□ 0.32
RAB43Q86YS6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB43Q86YS6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB43Q86YS6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB43Q86YS6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
RAB43Q86YS6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB43Q86YS6 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.06■□□□□ 0.32
RAB43Q86YS6 AC004263.2-201ENST00000617183 678 ntBASIC17.06■□□□□ 0.32
RAB43Q86YS6 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.06■□□□□ 0.32
RAB43Q86YS6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB43Q86YS6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RAB43Q86YS6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB43Q86YS6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB43Q86YS6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
RAB43Q86YS6 NSUN5P1-202ENST00000421140 1535 ntBASIC17.06■□□□□ 0.32
RAB43Q86YS6 NSUN5P2-203ENST00000457352 1529 ntBASIC17.06■□□□□ 0.32
RAB43Q86YS6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 AC112777.1-201ENST00000540175 1423 ntBASIC17.05■□□□□ 0.32
RAB43Q86YS6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 AL161938.1-201ENST00000569833 2180 ntBASIC17.05■□□□□ 0.32
RAB43Q86YS6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 AC113404.2-201ENST00000507884 177 ntBASIC17.05■□□□□ 0.32
RAB43Q86YS6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAB43Q86YS6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB43Q86YS6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 NUS1P2-201ENST00000417358 873 ntBASIC17.04■□□□□ 0.32
RAB43Q86YS6 KRT16P4-201ENST00000453883 522 ntBASIC17.04■□□□□ 0.32
RAB43Q86YS6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 AL160237.2-201ENST00000556165 472 ntBASIC17.04■□□□□ 0.32
RAB43Q86YS6 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 AL353801.3-201ENST00000609898 542 ntBASIC17.04■□□□□ 0.32
RAB43Q86YS6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 AL031008.1-201ENST00000619963 541 ntBASIC17.04■□□□□ 0.32
RAB43Q86YS6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB43Q86YS6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB43Q86YS6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms