Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PACS2Q86VP3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PACS2Q86VP3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18■□□□□ 0.47
PACS2Q86VP3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
PACS2Q86VP3 PAUPAR-201ENST00000630360 2965 ntBASIC18■□□□□ 0.47
PACS2Q86VP3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.99■□□□□ 0.47
PACS2Q86VP3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PACS2Q86VP3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.99■□□□□ 0.47
PACS2Q86VP3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PACS2Q86VP3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.99■□□□□ 0.47
PACS2Q86VP3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
PACS2Q86VP3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 AP001412.1-201ENST00000608405 714 ntBASIC17.99■□□□□ 0.47
PACS2Q86VP3 AP001002.2-201ENST00000625137 386 ntBASIC17.99■□□□□ 0.47
PACS2Q86VP3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.99■□□□□ 0.47
PACS2Q86VP3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.99■□□□□ 0.47
PACS2Q86VP3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PACS2Q86VP3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 AC022188.1-201ENST00000620960 1664 ntBASIC17.99■□□□□ 0.47
PACS2Q86VP3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.99■□□□□ 0.47
PACS2Q86VP3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PACS2Q86VP3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PACS2Q86VP3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 TSPY26P-202ENST00000565928 3884 ntBASIC17.98■□□□□ 0.47
PACS2Q86VP3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.98■□□□□ 0.47
PACS2Q86VP3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PACS2Q86VP3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.97■□□□□ 0.47
PACS2Q86VP3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.97■□□□□ 0.47
PACS2Q86VP3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.97■□□□□ 0.47
PACS2Q86VP3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PACS2Q86VP3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.97■□□□□ 0.47
PACS2Q86VP3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 YBX1P10-201ENST00000444752 975 ntBASIC17.97■□□□□ 0.47
PACS2Q86VP3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PACS2Q86VP3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.97■□□□□ 0.47
PACS2Q86VP3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.97■□□□□ 0.47
PACS2Q86VP3 RARRES2P10-201ENST00000564312 460 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms