Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 TNRC18P3-201ENST00000441896 2691 ntBASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 AP003733.1-201ENST00000491725 852 ntBASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 MIR149-201ENST00000384879 89 ntBASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 AC011498.5-201ENST00000592027 486 ntBASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 AC024563.2-201ENST00000603282 481 ntBASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 AL121672.3-201ENST00000608644 468 ntBASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 AC009102.3-201ENST00000623118 1491 ntBASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHMP1BQ7LBR1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 AL162741.1-201ENST00000565563 1558 ntBASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms