Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AL138831.2-201ENST00000606564 490 ntBASIC17.12■□□□□ 0.33
RNF44Q7L0R7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 AC012313.10-201ENST00000623509 926 ntBASIC17.12■□□□□ 0.33
RNF44Q7L0R7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF44Q7L0R7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.11■□□□□ 0.33
RNF44Q7L0R7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 AC099336.1-202ENST00000602961 463 ntBASIC17.11■□□□□ 0.33
RNF44Q7L0R7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 AC125634.1-201ENST00000438758 1403 ntBASIC17.11■□□□□ 0.33
RNF44Q7L0R7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF44Q7L0R7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 MINOS1P3-201ENST00000457048 203 ntBASIC17.1■□□□□ 0.33
RNF44Q7L0R7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 BNIP3P18-201ENST00000593976 575 ntBASIC17.1■□□□□ 0.33
RNF44Q7L0R7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms