Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 TSPY7P-201ENST00000431358 1114 ntBASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 AP003041.3-201ENST00000527151 707 ntBASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 AL121761.2-201ENST00000598007 1648 ntBASIC16.45■□□□□ 0.22
PTCHD4Q6ZW05 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 UNC93B2-201ENST00000285383 730 ntBASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 AC008550.1-201ENST00000511500 884 ntBASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCHD4Q6ZW05 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 AL138688.1-201ENST00000624851 1594 ntBASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 AL390955.1-201ENST00000428694 934 ntBASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms