Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 KRT8P47-201ENST00000604727 1398 ntBASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 HCG11-201ENST00000411553 5696 ntBASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 MIR1199-201ENST00000621445 119 ntBASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC149Q6ZUS6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 COX5BP2-201ENST00000392354 334 ntBASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 PRYP5-201ENST00000451909 266 ntBASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 AC006557.2-201ENST00000592985 1240 ntBASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC149Q6ZUS6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 SIGLEC16-201ENST00000599858 1437 ntBASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 AC009947.1-201ENST00000444350 727 ntBASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 MTDHP5-201ENST00000598980 586 ntBASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 PGM5P2-202ENST00000637225 1043 ntBASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC149Q6ZUS6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms