Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 DUTP2-201ENST00000519164 463 ntBASIC11.33□□□□□ -0.6
LINC00575Q6W349 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC00575Q6W349 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 Six3os1_6.1-201ENST00000620790 196 ntBASIC11.33□□□□□ -0.6
LINC00575Q6W349 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00575Q6W349 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00575Q6W349 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00575Q6W349 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00575Q6W349 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
LINC00575Q6W349 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00575Q6W349 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 AL603756.1-201ENST00000606511 2163 ntBASIC11.33□□□□□ -0.6
LINC00575Q6W349 UROS-202ENST00000368778 1556 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00575Q6W349 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00575Q6W349 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 AC099343.3-201ENST00000605834 2503 ntBASIC11.32□□□□□ -0.6
LINC00575Q6W349 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 ME3-201ENST00000323418 1068 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 KRT18P5-201ENST00000436075 1291 ntBASIC11.32□□□□□ -0.6
LINC00575Q6W349 ELP6-205ENST00000439305 880 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 VPS53-216ENST00000574029 585 ntTSL 4 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 AC131212.4-201ENST00000623606 975 ntBASIC11.32□□□□□ -0.6
LINC00575Q6W349 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00575Q6W349 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
LINC00575Q6W349 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 PCDHA1-201ENST00000378133 2726 ntBASIC11.31□□□□□ -0.6
LINC00575Q6W349 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00575Q6W349 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 MIR638-201ENST00000385237 100 ntBASIC11.31□□□□□ -0.6
LINC00575Q6W349 ZNRF2P3-201ENST00000424200 374 ntBASIC11.31□□□□□ -0.6
LINC00575Q6W349 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00575Q6W349 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms