Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 KRT18P38-201ENST00000449496 1282 ntBASIC18.05■□□□□ 0.48
PACS1Q6VY07 AC092647.4-201ENST00000457211 535 ntBASIC18.05■□□□□ 0.48
PACS1Q6VY07 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 KRT89P-201ENST00000620027 1478 ntBASIC18.04■□□□□ 0.48
PACS1Q6VY07 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 AL359075.1-203ENST00000462729 1002 ntBASIC18.04■□□□□ 0.48
PACS1Q6VY07 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 KRT18P21-201ENST00000515767 1272 ntBASIC18.04■□□□□ 0.48
PACS1Q6VY07 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 LINC01238-205ENST00000567549 1107 ntBASIC18.04■□□□□ 0.48
PACS1Q6VY07 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
PACS1Q6VY07 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PACS1Q6VY07 AL356309.3-201ENST00000624132 1934 ntBASIC18.04■□□□□ 0.48
PACS1Q6VY07 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 HYMAI.1-201ENST00000620949 238 ntBASIC18.03■□□□□ 0.48
PACS1Q6VY07 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 AC080080.1-201ENST00000625121 2420 ntBASIC18.03■□□□□ 0.48
PACS1Q6VY07 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PACS1Q6VY07 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PACS1Q6VY07 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PACS1Q6VY07 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms