Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.24■□□□□ 0.51
CASC4Q6P4E1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CASC4Q6P4E1 AC022898.2-201ENST00000616822 1312 ntBASIC18.23■□□□□ 0.51
CASC4Q6P4E1 LINC00602-201ENST00000629776 2065 ntBASIC18.22■□□□□ 0.51
CASC4Q6P4E1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 PVRIG2P-201ENST00000435460 978 ntBASIC18.22■□□□□ 0.51
CASC4Q6P4E1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 DUTP2-201ENST00000519164 463 ntBASIC18.22■□□□□ 0.51
CASC4Q6P4E1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 AC141257.4-201ENST00000634557 245 ntBASIC18.22■□□□□ 0.51
CASC4Q6P4E1 AC136944.6-201ENST00000634818 245 ntBASIC18.22■□□□□ 0.51
CASC4Q6P4E1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.22■□□□□ 0.51
CASC4Q6P4E1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASC4Q6P4E1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 AC012313.1-201ENST00000593393 3059 ntBASIC18.21■□□□□ 0.51
CASC4Q6P4E1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.21■□□□□ 0.51
CASC4Q6P4E1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms