Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KRT40Q6A162 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT40Q6A162 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT40Q6A162 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT40Q6A162 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT40Q6A162 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT40Q6A162 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT40Q6A162 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT40Q6A162 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT40Q6A162 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT40Q6A162 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT40Q6A162 TSPY12P-201ENST00000421279 868 ntBASIC20.69■□□□□ 0.9
KRT40Q6A162 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT40Q6A162 PRELID1P1-202ENST00000567272 903 ntBASIC20.69■□□□□ 0.9
KRT40Q6A162 GPR32P1-201ENST00000601788 811 ntBASIC20.69■□□□□ 0.9
KRT40Q6A162 AC006538.3-201ENST00000612495 578 ntBASIC20.69■□□□□ 0.9
KRT40Q6A162 AC023511.2-201ENST00000618803 211 ntBASIC20.69■□□□□ 0.9
KRT40Q6A162 AC009154.2-201ENST00000621177 724 ntBASIC20.69■□□□□ 0.9
KRT40Q6A162 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT40Q6A162 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
KRT40Q6A162 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT40Q6A162 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT40Q6A162 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
KRT40Q6A162 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT40Q6A162 KRT8P10-201ENST00000450021 1447 ntBASIC20.69■□□□□ 0.9
KRT40Q6A162 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT40Q6A162 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT40Q6A162 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
KRT40Q6A162 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
KRT40Q6A162 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT40Q6A162 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.68■□□□□ 0.9
KRT40Q6A162 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT40Q6A162 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 AL390719.2-201ENST00000606993 987 ntBASIC20.68■□□□□ 0.9
KRT40Q6A162 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
KRT40Q6A162 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
KRT40Q6A162 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
KRT40Q6A162 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT40Q6A162 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.68■□□□□ 0.9
KRT40Q6A162 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT40Q6A162 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT40Q6A162 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT40Q6A162 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 MIR3652-201ENST00000579335 131 ntBASIC20.67■□□□□ 0.9
KRT40Q6A162 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT40Q6A162 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
KRT40Q6A162 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT40Q6A162 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT40Q6A162 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
KRT40Q6A162 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT40Q6A162 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT40Q6A162 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
KRT40Q6A162 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT40Q6A162 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT40Q6A162 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT40Q6A162 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT40Q6A162 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT40Q6A162 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
KRT40Q6A162 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KRT40Q6A162 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT40Q6A162 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT40Q6A162 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT40Q6A162 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT40Q6A162 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT40Q6A162 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KRT40Q6A162 Z83836.1-201ENST00000624605 1642 ntBASIC20.66■□□□□ 0.9
KRT40Q6A162 AC009949.1-201ENST00000623048 1830 ntBASIC20.66■□□□□ 0.9
KRT40Q6A162 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KRT40Q6A162 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.66■□□□□ 0.9
KRT40Q6A162 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT40Q6A162 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT40Q6A162 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KRT40Q6A162 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT40Q6A162 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT40Q6A162 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KRT40Q6A162 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT40Q6A162 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms