Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 BX664615.1-201ENST00000443558 458 ntBASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF1Q5TC12 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 AC005521.1-201ENST00000393351 872 ntBASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 AC009947.2-201ENST00000444014 672 ntBASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 AC112497.1-201ENST00000624824 639 ntBASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 AC092865.7-201ENST00000641832 219 ntBASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF1Q5TC12 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ATPAF1Q5TC12 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF1Q5TC12 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF1Q5TC12 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.52■□□□□ 0.07
ATPAF1Q5TC12 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF1Q5TC12 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF1Q5TC12 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
ATPAF1Q5TC12 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.52■□□□□ 0.07
ATPAF1Q5TC12 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF1Q5TC12 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 KRT18P23-201ENST00000435622 1283 ntBASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 MIR3180-4-201ENST00000582223 153 ntBASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms