Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 AC096633.1-201ENST00000422446 749 ntBASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 AP005901.3-202ENST00000581653 237 ntBASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 LINC00304-203ENST00000565008 1864 ntBASIC18.77■□□□□ 0.6
PTPN20Q4JDL3 AC138932.1-201ENST00000534164 6830 ntBASIC18.77■□□□□ 0.59
PTPN20Q4JDL3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN20Q4JDL3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN20Q4JDL3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 TPSP2-201ENST00000561760 610 ntBASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 AP002414.4-201ENST00000589764 1148 ntBASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 AC091076.1-201ENST00000610741 619 ntBASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 LETM1P2-201ENST00000597330 2178 ntBASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 AC010460.3-201ENST00000511359 1579 ntBASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN20Q4JDL3 KRT18P1-202ENST00000452408 1331 ntBASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 AC011840.4-201ENST00000578471 627 ntBASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 MIR3180-1-201ENST00000580374 94 ntBASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 MIR3180-3-201ENST00000584616 94 ntBASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 NPAP1P7-201ENST00000613027 823 ntBASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN20Q4JDL3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 AC125634.1-201ENST00000438758 1403 ntBASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN20Q4JDL3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms