Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 AC016734.2-201ENST00000624325 1377 ntBASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO1Q2MKA7 LTB4R2-202ENST00000528054 3092 ntBASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 AC005104.2-201ENST00000427818 678 ntBASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 AC090616.6-201ENST00000582640 721 ntBASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 AL592071.1-201ENST00000611956 408 ntBASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 AL590326.2-201ENST00000625139 305 ntBASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 BX276092.7-203ENST00000637198 1536 ntBASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RSPO1Q2MKA7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 AC005336.2-201ENST00000593183 939 ntBASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.41■□□□□ 0.06
RSPO1Q2MKA7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms