Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
HMGXB3Q12766 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
HMGXB3Q12766 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
HMGXB3Q12766 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
HMGXB3Q12766 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
HMGXB3Q12766 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
HMGXB3Q12766 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC31.11■■■□□ 2.57
HMGXB3Q12766 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC31.11■■■□□ 2.57
HMGXB3Q12766 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC31.11■■■□□ 2.57
HMGXB3Q12766 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC31.11■■■□□ 2.57
HMGXB3Q12766 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC31.11■■■□□ 2.57
HMGXB3Q12766 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
HMGXB3Q12766 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
HMGXB3Q12766 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
HMGXB3Q12766 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
HMGXB3Q12766 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
HMGXB3Q12766 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC31.1■■■□□ 2.57
HMGXB3Q12766 CENPM-205ENST00000404067 905 ntTSL 3 BASIC31.1■■■□□ 2.57
HMGXB3Q12766 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC31.1■■■□□ 2.57
HMGXB3Q12766 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC31.1■■■□□ 2.57
HMGXB3Q12766 INGX-202ENST00000489074 768 ntBASIC31.1■■■□□ 2.57
HMGXB3Q12766 DUX4L17-201ENST00000557360 1267 ntBASIC31.1■■■□□ 2.57
HMGXB3Q12766 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC31.1■■■□□ 2.57
HMGXB3Q12766 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
HMGXB3Q12766 PC-208ENST00000529047 1607 ntTSL 3 BASIC31.1■■■□□ 2.57
HMGXB3Q12766 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
HMGXB3Q12766 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
HMGXB3Q12766 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
HMGXB3Q12766 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC31.1■■■□□ 2.57
HMGXB3Q12766 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
HMGXB3Q12766 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
HMGXB3Q12766 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC31.1■■■□□ 2.57
HMGXB3Q12766 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
HMGXB3Q12766 AC002056.1-201ENST00000395613 760 ntBASIC31.09■■■□□ 2.57
HMGXB3Q12766 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
HMGXB3Q12766 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HMGXB3Q12766 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HMGXB3Q12766 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HMGXB3Q12766 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
HMGXB3Q12766 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HMGXB3Q12766 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
HMGXB3Q12766 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC31.09■■■□□ 2.57
HMGXB3Q12766 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC31.09■■■□□ 2.57
HMGXB3Q12766 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC31.08■■■□□ 2.57
HMGXB3Q12766 FAM185BP-201ENST00000443595 716 ntBASIC31.08■■■□□ 2.57
HMGXB3Q12766 SPDYE11-202ENST00000450699 704 ntBASIC31.08■■■□□ 2.57
HMGXB3Q12766 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
HMGXB3Q12766 AP005018.1-201ENST00000525475 301 ntBASIC31.08■■■□□ 2.57
HMGXB3Q12766 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
HMGXB3Q12766 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
HMGXB3Q12766 THTPA-204ENST00000554970 569 ntTSL 4 BASIC31.08■■■□□ 2.57
HMGXB3Q12766 THTPA-206ENST00000556015 535 ntTSL 3 BASIC31.08■■■□□ 2.57
HMGXB3Q12766 AC140878.1-201ENST00000565277 250 ntBASIC31.08■■■□□ 2.57
HMGXB3Q12766 SPDYE9P-201ENST00000570642 692 ntBASIC31.08■■■□□ 2.57
HMGXB3Q12766 AL158211.3-201ENST00000607385 239 ntBASIC31.08■■■□□ 2.57
HMGXB3Q12766 SPDYE10P-202ENST00000612005 668 ntBASIC31.08■■■□□ 2.57
HMGXB3Q12766 SPDYE8P-202ENST00000612377 668 ntBASIC31.08■■■□□ 2.57
HMGXB3Q12766 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
HMGXB3Q12766 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
HMGXB3Q12766 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC31.08■■■□□ 2.57
HMGXB3Q12766 AC107890.1-201ENST00000422478 521 ntBASIC31.08■■■□□ 2.57
HMGXB3Q12766 HLA-V-201ENST00000429037 534 ntBASIC31.08■■■□□ 2.57
HMGXB3Q12766 AC125807.1-201ENST00000483097 614 ntBASIC31.08■■■□□ 2.57
HMGXB3Q12766 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC31.08■■■□□ 2.57
HMGXB3Q12766 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC31.08■■■□□ 2.57
HMGXB3Q12766 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.57
HMGXB3Q12766 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC31.07■■■□□ 2.57
HMGXB3Q12766 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC31.07■■■□□ 2.56
HMGXB3Q12766 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
HMGXB3Q12766 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC31.07■■■□□ 2.56
HMGXB3Q12766 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC31.07■■■□□ 2.56
HMGXB3Q12766 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
HMGXB3Q12766 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
HMGXB3Q12766 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC31.07■■■□□ 2.56
HMGXB3Q12766 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
HMGXB3Q12766 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
HMGXB3Q12766 HNRNPFP1-201ENST00000391730 1133 ntBASIC31.07■■■□□ 2.56
HMGXB3Q12766 FAM58DP-201ENST00000428076 619 ntBASIC31.07■■■□□ 2.56
HMGXB3Q12766 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC31.07■■■□□ 2.56
HMGXB3Q12766 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC31.07■■■□□ 2.56
HMGXB3Q12766 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
HMGXB3Q12766 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
HMGXB3Q12766 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
HMGXB3Q12766 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
HMGXB3Q12766 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
HMGXB3Q12766 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
HMGXB3Q12766 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
HMGXB3Q12766 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
HMGXB3Q12766 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
HMGXB3Q12766 RPL30-202ENST00000396070 440 ntTSL 2 BASIC31.06■■■□□ 2.56
HMGXB3Q12766 AL513480.1-201ENST00000451731 511 ntBASIC31.06■■■□□ 2.56
HMGXB3Q12766 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
HMGXB3Q12766 AL135744.1-201ENST00000565098 629 ntBASIC31.06■■■□□ 2.56
HMGXB3Q12766 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
HMGXB3Q12766 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC31.06■■■□□ 2.56
HMGXB3Q12766 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
HMGXB3Q12766 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
HMGXB3Q12766 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
HMGXB3Q12766 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
HMGXB3Q12766 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms