Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.46■□□□□ 0.71
GTF2BQ00403 AC096582.2-201ENST00000510860 516 ntBASIC19.46■□□□□ 0.71
GTF2BQ00403 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2BQ00403 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
GTF2BQ00403 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2BQ00403 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2BQ00403 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2BQ00403 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2BQ00403 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2BQ00403 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2BQ00403 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2BQ00403 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.46■□□□□ 0.71
GTF2BQ00403 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2BQ00403 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2BQ00403 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2BQ00403 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
GTF2BQ00403 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GTF2BQ00403 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2BQ00403 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GTF2BQ00403 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
GTF2BQ00403 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2BQ00403 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2BQ00403 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2BQ00403 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.45■□□□□ 0.7
GTF2BQ00403 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
GTF2BQ00403 AC005104.2-201ENST00000427818 678 ntBASIC19.45■□□□□ 0.7
GTF2BQ00403 FOSL1P1-201ENST00000511041 816 ntBASIC19.45■□□□□ 0.7
GTF2BQ00403 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2BQ00403 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.45■□□□□ 0.7
GTF2BQ00403 CLEC4GP1-201ENST00000596555 870 ntBASIC19.45■□□□□ 0.7
GTF2BQ00403 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2BQ00403 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2BQ00403 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
GTF2BQ00403 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2BQ00403 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GTF2BQ00403 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2BQ00403 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2BQ00403 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF2BQ00403 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2BQ00403 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GTF2BQ00403 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2BQ00403 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF2BQ00403 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
GTF2BQ00403 LINC00304-203ENST00000565008 1864 ntBASIC19.44■□□□□ 0.7
GTF2BQ00403 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF2BQ00403 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
GTF2BQ00403 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
GTF2BQ00403 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2BQ00403 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2BQ00403 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2BQ00403 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.44■□□□□ 0.7
GTF2BQ00403 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2BQ00403 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.44■□□□□ 0.7
GTF2BQ00403 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2BQ00403 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.44■□□□□ 0.7
GTF2BQ00403 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.44■□□□□ 0.7
GTF2BQ00403 MIR5100-201ENST00000579544 119 ntBASIC19.44■□□□□ 0.7
GTF2BQ00403 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.44■□□□□ 0.7
GTF2BQ00403 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2BQ00403 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2BQ00403 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
GTF2BQ00403 LINC01451-201ENST00000623792 534 ntBASIC19.44■□□□□ 0.7
GTF2BQ00403 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2BQ00403 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
GTF2BQ00403 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2BQ00403 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
GTF2BQ00403 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2BQ00403 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2BQ00403 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF2BQ00403 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GTF2BQ00403 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
GTF2BQ00403 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF2BQ00403 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.43■□□□□ 0.7
GTF2BQ00403 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF2BQ00403 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2BQ00403 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF2BQ00403 TSPY19P-201ENST00000418461 509 ntBASIC19.43■□□□□ 0.7
GTF2BQ00403 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF2BQ00403 TSPY18P-201ENST00000441642 509 ntBASIC19.43■□□□□ 0.7
GTF2BQ00403 KRT16P4-201ENST00000453883 522 ntBASIC19.43■□□□□ 0.7
GTF2BQ00403 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF2BQ00403 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.43■□□□□ 0.7
GTF2BQ00403 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.43■□□□□ 0.7
GTF2BQ00403 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.43■□□□□ 0.7
GTF2BQ00403 AC138894.3-201ENST00000603787 634 ntBASIC19.43■□□□□ 0.7
GTF2BQ00403 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.43■□□□□ 0.7
GTF2BQ00403 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms