Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.68■□□□□ 0.58
CBX1P83916 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX1P83916 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX1P83916 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX1P83916 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CBX1P83916 AL356441.2-201ENST00000443009 864 ntBASIC18.68■□□□□ 0.58
CBX1P83916 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.68■□□□□ 0.58
CBX1P83916 AC024257.2-201ENST00000549699 147 ntBASIC18.68■□□□□ 0.58
CBX1P83916 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.68■□□□□ 0.58
CBX1P83916 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX1P83916 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX1P83916 AL365203.3-201ENST00000609742 2057 ntBASIC18.68■□□□□ 0.58
CBX1P83916 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CBX1P83916 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CBX1P83916 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX1P83916 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX1P83916 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX1P83916 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CBX1P83916 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX1P83916 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX1P83916 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX1P83916 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX1P83916 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CBX1P83916 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CBX1P83916 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CBX1P83916 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CBX1P83916 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX1P83916 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 MIR572-201ENST00000384983 95 ntBASIC18.67■□□□□ 0.58
CBX1P83916 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CBX1P83916 AC099791.1-201ENST00000416440 715 ntBASIC18.67■□□□□ 0.58
CBX1P83916 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX1P83916 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX1P83916 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CBX1P83916 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.67■□□□□ 0.58
CBX1P83916 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX1P83916 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.67■□□□□ 0.58
CBX1P83916 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX1P83916 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX1P83916 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CBX1P83916 RNF216P1-203ENST00000404404 2427 ntBASIC18.66■□□□□ 0.58
CBX1P83916 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CBX1P83916 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CBX1P83916 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.66■□□□□ 0.58
CBX1P83916 AC092364.2-201ENST00000596710 2692 ntBASIC18.66■□□□□ 0.58
CBX1P83916 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX1P83916 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX1P83916 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX1P83916 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX1P83916 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CBX1P83916 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.66■□□□□ 0.58
CBX1P83916 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CBX1P83916 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CBX1P83916 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CBX1P83916 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CBX1P83916 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.66■□□□□ 0.58
CBX1P83916 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CBX1P83916 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX1P83916 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX1P83916 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CBX1P83916 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.65■□□□□ 0.58
CBX1P83916 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.65■□□□□ 0.58
CBX1P83916 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CBX1P83916 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms