Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
IRX3P78415 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
IRX3P78415 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 KRT18P3-201ENST00000451602 1288 ntBASIC20.72■□□□□ 0.91
IRX3P78415 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.72■□□□□ 0.91
IRX3P78415 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX3P78415 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.72■□□□□ 0.91
IRX3P78415 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX3P78415 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.72■□□□□ 0.91
IRX3P78415 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
IRX3P78415 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX3P78415 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
IRX3P78415 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.72■□□□□ 0.91
IRX3P78415 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
IRX3P78415 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
IRX3P78415 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
IRX3P78415 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX3P78415 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX3P78415 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.71■□□□□ 0.91
IRX3P78415 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
IRX3P78415 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.71■□□□□ 0.91
IRX3P78415 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
IRX3P78415 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.71■□□□□ 0.91
IRX3P78415 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.71■□□□□ 0.91
IRX3P78415 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.71■□□□□ 0.91
IRX3P78415 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
IRX3P78415 AP000867.4-201ENST00000641616 219 ntBASIC20.71■□□□□ 0.91
IRX3P78415 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.71■□□□□ 0.91
IRX3P78415 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX3P78415 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
IRX3P78415 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
IRX3P78415 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX3P78415 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.7■□□□□ 0.9
IRX3P78415 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.7■□□□□ 0.9
IRX3P78415 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.7■□□□□ 0.9
IRX3P78415 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
IRX3P78415 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX3P78415 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.7■□□□□ 0.9
IRX3P78415 LAGE3P1-201ENST00000425356 484 ntBASIC20.7■□□□□ 0.9
IRX3P78415 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.7■□□□□ 0.9
IRX3P78415 AC007967.3-201ENST00000434308 558 ntBASIC20.7■□□□□ 0.9
IRX3P78415 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.7■□□□□ 0.9
IRX3P78415 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.7■□□□□ 0.9
IRX3P78415 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX3P78415 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.7■□□□□ 0.9
IRX3P78415 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
IRX3P78415 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX3P78415 GMCL1P1-201ENST00000463439 1581 ntBASIC20.7■□□□□ 0.9
IRX3P78415 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX3P78415 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX3P78415 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.7■□□□□ 0.9
IRX3P78415 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX3P78415 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX3P78415 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX3P78415 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.7■□□□□ 0.9
IRX3P78415 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.7■□□□□ 0.9
IRX3P78415 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.7■□□□□ 0.9
IRX3P78415 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX3P78415 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.69■□□□□ 0.9
IRX3P78415 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
IRX3P78415 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
IRX3P78415 AP002414.3-201ENST00000589352 1468 ntBASIC20.69■□□□□ 0.9
IRX3P78415 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX3P78415 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.69■□□□□ 0.9
IRX3P78415 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX3P78415 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX3P78415 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IRX3P78415 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
IRX3P78415 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.69■□□□□ 0.9
IRX3P78415 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX3P78415 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms