Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.93■□□□□ 0.3
RAE1P78406 TMPOP1-202ENST00000424642 1267 ntBASIC16.93■□□□□ 0.3
RAE1P78406 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.93■□□□□ 0.3
RAE1P78406 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.93■□□□□ 0.3
RAE1P78406 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.93■□□□□ 0.3
RAE1P78406 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.93■□□□□ 0.3
RAE1P78406 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RAE1P78406 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAE1P78406 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RAE1P78406 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RAE1P78406 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RAE1P78406 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAE1P78406 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAE1P78406 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RAE1P78406 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAE1P78406 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.92■□□□□ 0.3
RAE1P78406 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.92■□□□□ 0.3
RAE1P78406 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.92■□□□□ 0.3
RAE1P78406 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.92■□□□□ 0.3
RAE1P78406 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAE1P78406 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RAE1P78406 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.92■□□□□ 0.3
RAE1P78406 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAE1P78406 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.92■□□□□ 0.3
RAE1P78406 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAE1P78406 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.92■□□□□ 0.3
RAE1P78406 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAE1P78406 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RAE1P78406 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.92■□□□□ 0.3
RAE1P78406 CROCCP2-202ENST00000412962 2773 ntBASIC16.92■□□□□ 0.3
RAE1P78406 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAE1P78406 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAE1P78406 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RAE1P78406 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAE1P78406 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RAE1P78406 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.92■□□□□ 0.3
RAE1P78406 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.91■□□□□ 0.3
RAE1P78406 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.91■□□□□ 0.3
RAE1P78406 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.91■□□□□ 0.3
RAE1P78406 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RAE1P78406 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.91■□□□□ 0.3
RAE1P78406 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.91■□□□□ 0.3
RAE1P78406 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAE1P78406 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.91■□□□□ 0.3
RAE1P78406 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.9■□□□□ 0.3
RAE1P78406 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RAE1P78406 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.9■□□□□ 0.3
RAE1P78406 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.9■□□□□ 0.3
RAE1P78406 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.9■□□□□ 0.3
RAE1P78406 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.9■□□□□ 0.3
RAE1P78406 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 AL023806.1-201ENST00000603994 1649 ntBASIC16.9■□□□□ 0.3
RAE1P78406 AL645929.1-201ENST00000420084 975 ntBASIC16.9■□□□□ 0.3
RAE1P78406 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.9■□□□□ 0.3
RAE1P78406 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.9■□□□□ 0.3
RAE1P78406 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.9■□□□□ 0.3
RAE1P78406 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.9■□□□□ 0.3
RAE1P78406 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.9■□□□□ 0.3
RAE1P78406 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.9■□□□□ 0.3
RAE1P78406 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.9■□□□□ 0.3
RAE1P78406 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RAE1P78406 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAE1P78406 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAE1P78406 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms