Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHC1P78364 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHC1P78364 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PHC1P78364 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PHC1P78364 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.02■□□□□ 0.32
PHC1P78364 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHC1P78364 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHC1P78364 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.02■□□□□ 0.32
PHC1P78364 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHC1P78364 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHC1P78364 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHC1P78364 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHC1P78364 LINC00304-203ENST00000565008 1864 ntBASIC17.02■□□□□ 0.32
PHC1P78364 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.02■□□□□ 0.32
PHC1P78364 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PHC1P78364 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.02■□□□□ 0.32
PHC1P78364 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.02■□□□□ 0.32
PHC1P78364 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHC1P78364 AC092865.7-201ENST00000641832 219 ntBASIC17.02■□□□□ 0.32
PHC1P78364 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PHC1P78364 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHC1P78364 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHC1P78364 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHC1P78364 AP001094.4-201ENST00000579008 2176 ntBASIC17.02■□□□□ 0.31
PHC1P78364 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PHC1P78364 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PHC1P78364 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PHC1P78364 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHC1P78364 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHC1P78364 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHC1P78364 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
PHC1P78364 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PHC1P78364 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PHC1P78364 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PHC1P78364 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.01■□□□□ 0.31
PHC1P78364 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.01■□□□□ 0.31
PHC1P78364 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PHC1P78364 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.01■□□□□ 0.31
PHC1P78364 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 AC022211.2-201ENST00000585075 2527 ntBASIC17.01■□□□□ 0.31
PHC1P78364 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PHC1P78364 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.01■□□□□ 0.31
PHC1P78364 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.01■□□□□ 0.31
PHC1P78364 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.01■□□□□ 0.31
PHC1P78364 ECEL1P3-201ENST00000427961 737 ntBASIC17.01■□□□□ 0.31
PHC1P78364 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.01■□□□□ 0.31
PHC1P78364 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.01■□□□□ 0.31
PHC1P78364 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.01■□□□□ 0.31
PHC1P78364 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.01■□□□□ 0.31
PHC1P78364 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.01■□□□□ 0.31
PHC1P78364 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
PHC1P78364 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.01■□□□□ 0.31
PHC1P78364 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.01■□□□□ 0.31
PHC1P78364 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
PHC1P78364 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHC1P78364 AC084018.2-201ENST00000613093 2607 ntBASIC17■□□□□ 0.31
PHC1P78364 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17■□□□□ 0.31
PHC1P78364 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PHC1P78364 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PHC1P78364 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PHC1P78364 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 AL023806.1-201ENST00000603994 1649 ntBASIC17■□□□□ 0.31
PHC1P78364 REXO1L11P-201ENST00000620964 1927 ntBASIC17■□□□□ 0.31
PHC1P78364 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PHC1P78364 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17■□□□□ 0.31
PHC1P78364 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17■□□□□ 0.31
PHC1P78364 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
PHC1P78364 CROCCP2-202ENST00000412962 2773 ntBASIC17■□□□□ 0.31
PHC1P78364 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17■□□□□ 0.31
PHC1P78364 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17■□□□□ 0.31
PHC1P78364 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PHC1P78364 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17■□□□□ 0.31
PHC1P78364 AL138688.1-201ENST00000624851 1594 ntBASIC17■□□□□ 0.31
PHC1P78364 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PHC1P78364 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PHC1P78364 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms