Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
YBX1P67809 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YBX1P67809 AC100803.2-201ENST00000562459 1963 ntBASIC17.4■□□□□ 0.38
YBX1P67809 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
YBX1P67809 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
YBX1P67809 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
YBX1P67809 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.4■□□□□ 0.38
YBX1P67809 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.4■□□□□ 0.38
YBX1P67809 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 UPK3BP1-201ENST00000428678 509 ntBASIC17.4■□□□□ 0.38
YBX1P67809 AP002383.4-201ENST00000442518 975 ntBASIC17.4■□□□□ 0.38
YBX1P67809 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.4■□□□□ 0.38
YBX1P67809 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.4■□□□□ 0.38
YBX1P67809 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
YBX1P67809 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 AC091076.1-201ENST00000610741 619 ntBASIC17.4■□□□□ 0.38
YBX1P67809 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.4■□□□□ 0.38
YBX1P67809 AC093458.2-201ENST00000623150 629 ntBASIC17.4■□□□□ 0.38
YBX1P67809 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.4■□□□□ 0.38
YBX1P67809 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 PRORSD1P-202ENST00000563365 2154 ntBASIC17.4■□□□□ 0.38
YBX1P67809 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
YBX1P67809 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.4■□□□□ 0.38
YBX1P67809 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YBX1P67809 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
YBX1P67809 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
YBX1P67809 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.39■□□□□ 0.38
YBX1P67809 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
YBX1P67809 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
YBX1P67809 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.39■□□□□ 0.37
YBX1P67809 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.39■□□□□ 0.37
YBX1P67809 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.39■□□□□ 0.37
YBX1P67809 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
YBX1P67809 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.39■□□□□ 0.37
YBX1P67809 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
YBX1P67809 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.39■□□□□ 0.37
YBX1P67809 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 KRT8P26-201ENST00000534154 1276 ntBASIC17.39■□□□□ 0.37
YBX1P67809 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.39■□□□□ 0.37
YBX1P67809 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
YBX1P67809 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
YBX1P67809 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
YBX1P67809 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
YBX1P67809 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.39■□□□□ 0.37
YBX1P67809 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
YBX1P67809 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YBX1P67809 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.38■□□□□ 0.37
YBX1P67809 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.38■□□□□ 0.37
YBX1P67809 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
YBX1P67809 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.38■□□□□ 0.37
YBX1P67809 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
YBX1P67809 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms